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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788123.1_cds_XP_016447033.1_391
CDS Infomation

[gene=LOC107772037] [db_xref=GeneID:107772037] [protein=endoplasmic reticulum metallopeptidase 1-like] [protein_id=XP_016447033.1] [location=join(50699..51007,51815..52053,55129..55285,59479..59556,59889..59963,60083..60202,61589..61753,76935..77460,77684..77840,83587..83696,86381..86493,88646..89003,94875..95191)] [gbkey=CDS]
Sequence

ATGAGGCAGAGGTCTAAAGGTTCTGCACAATCTAAGCCATCGAGTATACCTGAGACAAGT
AATTCCGAGGACACTGTGGTTCTGGTAGCTAAGAGGTCAAAGTATGTGATTTTGGCATTG
TTTGTGCTAGTGACATATGGAACTTGGTCTGTGTATCAACATCAGTTTCTCAATCTTCCT
AAGCCTCTTGGTGCTGAAGAAGTTGGTAAGAGGGGTTTCTCCGAGCATGAAGCCATCAAA
CATGTTAAAGCATTGACTCAGTTGGGTCCACATCCTGTTGGCTCAGATGCATTGGATCAT
GCCTTGCAGTACGTCTTGCAAGCCACAGAAACTATTAAAGAAAAAGCTCATTGGGAAGTT
GACGTAGAATTAGATCTTTTTCATGCTAAATCTGGCGCTAATCTTATGGTTGGTGGACTT
TTCAAGGGGAAAACTCTTGTTTATTCAGATCTGAATCACGTTGTACTAAGGATCTCGCCG
AAATATGCACCTGAAGCAACAGAAAATGCTATTCTAGTGTCTTCCCACATTGATACTGTG
TTTTCCGCTGAAGGGGCTGGAGACTGTAGTTCATGTGTAGCTGTTATGCTGGAGCTTGCT
CGAGGAGTGTCTCAATGGGCTCACGGCTTCAAAAGTGCTGTAATTTTTTTGTTTAATACA
GGAGAAGAGGAGGGCTTAAATGGTGCTCACAGCTTTATAACTCAGCACCCTTGGAGTGAT
ACTGTAACAATGGCTATTGACTTGGAGGCCATGGGTGTTGGAGGGAAGTCAGGAATATTT
CAGGCTGGTCCTCAGCCATGGGCAATTGAAAATTTTGCCTTGGCAGCAAAATATCCATCT
GGCCAAATAGTTGCACAGGACGTATTTAAATCCGGGGCAATAAAATCTGCTACCGATTTC
CAAGTGTACCAAGAGCTTGCCGGTCTTTCTGGTCTGGACTTTGCATATGCTGATAATACT
GCCGTATACCACACAAAGAATGACAAATTAAAGCTTTTGAAGCCTGGTTCTCTTCAACAT
CTTGGAGAAAATATGCTTGCTTTTCTGCTTAAGGTTGCAACTTCTGCTCATCTTCCCAAA
GGCAAGGCGACAGATTCCCGTGGAAAATCTGACCAGGATACTGCTATATATTTTGACATT
TTGGGAACATACATGGTTGTGTTCCGTCAGCGTTTTGCCAGGATGCTCTACAATTCAGTG
ATATTGCAGTCAATTTTAATATGGACAACATCATTATTCATGGGTGGATATTCTGCCATG
GTATCATTGGCCTTATCATCCTTGAGTCTCATTCTCATGTGGATATGTGCTATCGGTTTC
TCCTTACTTGTTGCCTTTGTTCTTCCCCTCGTATCATCTTCGCCTATTCCCTTTGTTTCA
AGTCCATGGCTAGTAGTTGGTTTGTTCGGTGCACCTGCGGTGCTCGGGGCATTCACTGGT
CAACATGTGGGTTATCTCATTCTGGTGAAGTATCTGACAAAGACATTTTCGAGAAGAAAC
GTGAACCTGTCTTTCGTTGTGCAAGATGATCTGGCAAAGTTAGATGCTGAGAGATGGCTC
TTTAAAGCTGGTTTGATGCAGTGGCTTGTTCTTTTGATTATGGGAAACTTTTACAAGATA
GGATCTTCTTATTTGGCTCTTGTTTGGCTAGCCTCTCCTGCATTTGCATATGGATTGCTT
GAAGCAACTTTATCACCTGCACGGCTGCCAAAACCACTCAAAACGGTCACTTTGCTGATT
GGGTTATCCGTTCCTTTCTTGCTTTCTTCTGGCATAATTATTCATTTGGTTGCCACACTA
ATTGGCTCTGCAGTTCGACTTGAAAGGAGTCCTGGCAGCAACCCTGAGTGGCTGGGCAAT
ATAATAATTGCAGTACTTATTGCTGCCATAGCATGTTTGACGCTGGTATATCTTTTGTCA
TATATTCATATTTCAGGTGCAAAGGTGCCACTTATTACAGTGACCTGTATTCTGTTTGGC
ATCTCGCTTGCAATGGTTCAACTAGGTGTTGTTCCTCCATTTACTGAAGATACTGCCAGA
GCTGTAAATGTTGTGCATGTTGTAGATATGAGAGGAGCTAATGGCAAAAAGCAAGAACCA
GTTTCTCGCATCTCCTTGTTTTCAGCCACTCCAGGAAATCTAATAAAGGAGGTTGAACAG
ATTGGAGAAGGATTTGTTTGTGGTACTGATGAGCCTCTTGATTTTGTAACATTTTCGGTC
AAATATGGTTGTTGGAGCGACAAGAATGCTAATATTGGCTGGCATGAGCTAGATATTCCT
CTGATTCATGTTGAGAATGATACCAAGGGTGACAATAGAGTTACTCATGTATCCATTGAC
ACTAAAGTATCCACACGCTGGACTCTGGGCATCAACACTGATGAGATCGAGGATTTCCAG
TTGAAAGACGGTACCGAGGAGTTGGTCCCAATTGGCGACAAGAGTAATGCAGACGGATGG
CACATAATTCAGTTTTCAGGAGGGAAGAAGGCACCAAGGAAATTCAGTCTGACGCTTTTC
TGGGCCAACAATCATACTCATAAGTCTCAGAAGAAGGATAGCAACATAGAGCAACCCTTG
CTAAAATTGAGGACAGATGTTGATAGAATTACTTCCCCAACTGAAACAGTACTTAAGAAG
CTTCCTCGGTGGTGTTCTTTGTTTGGAAAGTCCACATCTCCTCTTACCTTAGCTTTCTTG
AGTAGTTTATCAATTGATTTCTAA

Peptide Sequence

PEP ID

XP_016447033.1
PEP Infomation

PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Nicotiana tabacum]
Sequence

MRQRSKGSAQSKPSSIPETSNSEDTVVLVAKRSKYVILALFVLVTYGTWSVYQHQFLNLP
KPLGAEEVGKRGFSEHEAIKHVKALTQLGPHPVGSDALDHALQYVLQATETIKEKAHWEV
DVELDLFHAKSGANLMVGGLFKGKTLVYSDLNHVVLRISPKYAPEATENAILVSSHIDTV
FSAEGAGDCSSCVAVMLELARGVSQWAHGFKSAVIFLFNTGEEEGLNGAHSFITQHPWSD
TVTMAIDLEAMGVGGKSGIFQAGPQPWAIENFALAAKYPSGQIVAQDVFKSGAIKSATDF
QVYQELAGLSGLDFAYADNTAVYHTKNDKLKLLKPGSLQHLGENMLAFLLKVATSAHLPK
GKATDSRGKSDQDTAIYFDILGTYMVVFRQRFARMLYNSVILQSILIWTTSLFMGGYSAM
VSLALSSLSLILMWICAIGFSLLVAFVLPLVSSSPIPFVSSPWLVVGLFGAPAVLGAFTG
QHVGYLILVKYLTKTFSRRNVNLSFVVQDDLAKLDAERWLFKAGLMQWLVLLIMGNFYKI
GSSYLALVWLASPAFAYGLLEATLSPARLPKPLKTVTLLIGLSVPFLLSSGIIIHLVATL
IGSAVRLERSPGSNPEWLGNIIIAVLIAAIACLTLVYLLSYIHISGAKVPLITVTCILFG
ISLAMVQLGVVPPFTEDTARAVNVVHVVDMRGANGKKQEPVSRISLFSATPGNLIKEVEQ
IGEGFVCGTDEPLDFVTFSVKYGCWSDKNANIGWHELDIPLIHVENDTKGDNRVTHVSID
TKVSTRWTLGINTDEIEDFQLKDGTEELVPIGDKSNADGWHIIQFSGGKKAPRKFSLTLF
WANNHTHKSQKKDSNIEQPLLKLRTDVDRITSPTETVLKKLPRWCSLFGKSTSPLTLAFL
SSLSIDF

Transcript Sequence

Gene sequence data has not been registered.